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TaxonRenormalizer
- Class in
be.ac.ulb.mlg.utils.renormalizer
This class represents a normalization with taxa.
TaxonRenormalizer()
- Constructor for class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizer
Construct a new TaxonRenormalizer without predefined values Default applied renormalization is the default renormalization of the
DefaultRenormalizer
TaxonRenormalizerTest
- Class in
be.ac.ulb.mlg.utils.renormalizer
TaxonRenormalizerTest()
- Constructor for class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
tearDown()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
tearDown()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testAddFeature()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testBasic()
- Method in class be.ac.ulb.mlg.utils.
MeasurerTest
testCountFeatures()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testCountGroups()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testgetGroupResult()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testGetIndexResult()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testgetNamedResult()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testGroupOf()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testIgnore()
- Method in class be.ac.ulb.mlg.utils.
MeasurerTest
testIgnoreMissing()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testIsHighestLevel()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testIsHighLevel()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testIsLowLevel()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testIsUsingFeatures()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testIsUsingGroups()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testMissing()
- Method in class be.ac.ulb.mlg.utils.
MeasurerTest
testMultipleMeasures()
- Method in class be.ac.ulb.mlg.utils.
MeasurerTest
testNative()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testNative()
- Method in class be.ac.ulb.mlg.utils.
MeasurerTest
testNoFeatures()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testNoGroups()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testNormalize()
- Method in class be.ac.ulb.mlg.utils.
MeasurerTest
testNormalizeInput()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testNormalizeInput()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testNormalizeOutput()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testNormalizeOutput()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testProcessInput()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testProcessInput()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testProcessOutput()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testProcessOutput()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testReset()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testResetNormalizer()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testSetGroups()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testSetGroupsNames()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testSetNormalizer()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testSetNormalizerGroups()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testSetNormalizerSimple()
- Method in class be.ac.ulb.mlg.utils.
DefaultRenormalizerTest
testSetTaxa()
- Method in class be.ac.ulb.mlg.utils.renormalizer.
TaxonRenormalizerTest
testShuffle()
- Method in class be.ac.ulb.mlg.utils.
MeasurerTest
testThreads()
- Method in class be.ac.ulb.mlg.utils.
MeasurerTest
TestUtils
- Class in
be.ac.ulb.mlg.utils
TestUtils()
- Constructor for class be.ac.ulb.mlg.utils.
TestUtils
TestUtils.DataSize
- Enum in
be.ac.ulb.mlg.utils
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
BrayCurtis
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
BrownCorrelation
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.entropy.
DirichletEntropy
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
Entropy
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
Euclidean
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
Hellinger
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
HilbertSchmidt
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
JensenShannon
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
Kendall
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
KullbackLeibler
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
MutualInformation
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
Pearson
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
Spearman
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
Steinhaus
transform(double[][])
- Method in interface be.ac.ulb.mlg.utils.
Measure
The transformation method called before measurement
transform(double[][])
- Method in class be.ac.ulb.mlg.utils.measure.
VarianceOfLogRatios
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