# CoNet vs. 1.0b3 parameter values
# Time of export: Wed Oct 23 09:46:31 CEST 2013
# input
inputformat==biomtable
higherleveltaxa==true
# transpose feature matrix and match samples to OTU matrix
transposefeatures==true
matchfeaturesamples==true
# preprocessing
filter==row_minocc/noinclusivetaxalinks
filterparameter==20.0
stand==col_norm
# methods
method==ensemble
ensemblemethods==correl_pearson/correl_spearman/sim_mutInfo/dist_bray/dist_kullbackleibler
mi_implementation==jsl
minetdisc==equalfreq
networkmergestrategy==union
multigraph==true
# initial edge number
thresholdguessing==edgeNumber
guessingparam==1000.0
topbottom==true