| • new: can parse biom files |
| • support for lagged similarity computation in time series |
| • automatic assignment of higher-level taxa from lineages |
| • large choice of correlation, distance and similarity measures |
| • measures can be combined in multiple ways |
| • implements the ReBoot procedure (published in PLoS Comp Bio),
which is also available through ccrepe
|
| • significance can be tested with various randomization routines and multiple testing corrections |
| • supports row groups and combination of 2 input matrices |
| • several data preprocessing and filtering options |
| • repeatable data analysis with settings loading and saving |
| • command line tool for the analysis of large data sets |
