CoNet - Co-occurrence Network inference

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CoNet - Tutorials

  1. Costello data subset: demonstrates basic multigraph generation

  2. Chaffron's presence/absence data subset: demonstrates network construction from presence/absence data

  3. HMP 16S V35 phylotypes data subset: demonstrates full pipeline with groups (body sites)

  4. Lauber soils: demonstrates network construction from QIIME biom data and intersection graphs

  5. Arctic soils: demonstrates full pipeline with QIIME biom data and mapping file