Microbial association network construction tutorial

Links

Here you can find a collection of links to databases and tools mentioned in this tutorial.

Data sources for microbial network construction:

• EMP database
• QIIME database

Microbial network construction tools:

• CoNet
• fastLSA
• LSA (original)
• MENA
• SparCC

Related tools:

• biom converter
• Cytoscape
• CytoCluster
• MCL
• R
• igraph
• NeAT